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organic chemistry/0x05-tools

simulation ][ pymol 시뮬레이션 사용해보기

by SpeeDr00t 2019. 12. 27.
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simulation ][ pymol 시뮬레이션 사용해보기

■ 설치 및 test 파일 확보

개발사 : https://pymol.org/
git clone https://github.com/schrodinger/pymol-open-source
python2
sudo apt-get install python-dev build-essential libssl-dev libffi-dev libxml2-dev libxslt1-dev zlib1g-dev python-pip
python3
sudo apt-get install python3 python-dev python3-dev build-essential libssl-dev libffi-dev libxml2-dev libxslt1-dev zlib1g-dev python-pip
pip install scrapy
pip install numpy
sudo apt-get install freeglut3-dev libglu1-mesa-dev mesa-common-dev libglew-dev libglm-dev libnetcdf-dev libnetcdf-dev libfreetype6-dev
sudo python setup.py install
sudo python3 setup.py install
hacker@ubuntu:~/src/pymol-open-source/examples/chempy$ python generate_amber.py
hacker@ubuntu:~/src/pymol-open-source/examples/chempy$ python generate_mmff.py
view raw pymol.sh hosted with ❤ by GitHub

■ 윈도우 버전 설치

확보한 테스트 파일 더블클릭

 

 

 

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